Publications

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2026

• NeuroSimo: an open-source software for closed-loop EEG- or EMG-guided TMS
  Olli-Pekka Kahilakoski, Kyösti Alkio, Oula Siljamo, Kim Valén, Joonas Laurinoja, et al. · bioRxiv · 2 citations

• Pulse waveform and current direction alter network-level TMS-induced functional connectivity: Evidence from TMS-EEG
  Delia Lucarelli, G. Guidali, Roberto Guidotti, Giulia Pieramico, N. Bolognini, et al. · NeuroImage

2025

• Investigating brain network dynamics in state-dependent stimulation: A concurrent electroencephalography and transcranial magnetic stimulation study using hidden Markov models
  Saeed Makkinayeri, Roberto Guidotti, Alessio Basti, M. Woolrich, C. Gohil, et al. · Brain Stimulation · 5 citations

• Meditation induces shifts in neural oscillations, brain complexity, and critical dynamics: novel insights from MEG
  A. Pascarella, Philipp Thölke, David Meunier, Jordan O’Byrne, Tarek Lajnef, et al. · Neuroscience of Consciousness · 3 citations

• Specialization for different memory dimensions in brain activity evoked by cued recollection
  Federica Procida, Matteo Frisoni, M.G. Tullo, A. Tosoni, M. G. Perrucci, et al. · NeuroImage · 1 citations

• Predictive modeling of TMS-evoked responses: Unraveling instantaneous excitability states
  Oskari Ahola, L. Haxel, M. Ermolova, Dania Humaidan, T. Mutanen, et al. · bioRxiv · 1 citations

• Comparing efficacy of serotonergic, opioidergic, and glutamatergic drugs in gambling disorder: A pooled analysis of response trajectories versus placebo.
  M. Pettorruso, F. Di Carlo, Giorgio Di Lorenzo, Carmine Gelormini, Roberto Guidotti, et al. · Journal of psychiatric research · 1 citations

• Motor system excitability is influenced by the cardiac cycle: a TMS-EEG study
  Delia Lucarelli, Roberto Guidotti, Giulia Pieramico, Domenico Voso, G. Romani, et al. · Brain Stimulation · 1 citations

• Robustness of brain state identification in synthetic phase-coupled neurodynamics using Hidden Markov Models
  Giulia Pieramico, Saeed Makkinayeri, Roberto Guidotti, Alessio Basti, Domenico Voso, et al. · Frontiers in Systems Neuroscience

• Corrigendum to “Specialization for different memory dimensions in brain activity evoked by cued recollection” [NeuroImage 308 (2025) 121068]
  Federica Procida, Matteo Frisoni, M.G. Tullo, A. Tosoni, M. G. Perrucci, et al. · NeuroImage

• NeuroSimo: an open-source software for real-time EEG- and EMG-guided TMS
  Olli-Pekka Kahilakoski, Kyösti Alkio, Oula Siljamo, Kim Valén, Matilda Makkonen, et al. · Brain Stimulation

• Dynamic topological changes of the motor network after stroke
  A. Baldassarre, Roberto Guidotti, V. Pizzella, M. S. Bassi, Luigi Pavone, et al. · NeuroImage : Clinical

2024

• When neuromodulation met control theory
  Roberto Guidotti, Alessio Basti, Giulia Pieramico, A. D’Andrea, Saeed Makkinayeri, et al. · Journal of Neural Engineering · 7 citations

• Overcoming treatment-resistant depression with machine-learning based tools: a study protocol combining EEG and clinical data to personalize glutamatergic and brain stimulation interventions (SelecTool Project)
  M. Pettorruso, Giorgio Di Lorenzo, Beatrice Benatti, G. d’Andrea, C. Cavallotto, et al. · Frontiers in Psychiatry · 6 citations

• Exploring Motor Network Connectivity in State-Dependent Transcranial Magnetic Stimulation: A Proof-of-Concept Study
  L. Marzetti, Alessio Basti, Roberto Guidotti, A. Baldassarre, J. Metsomaa, et al. · Biomedicines · 6 citations

• A bicoherence approach to analyze multi-dimensional cross-frequency coupling in EEG/MEG data
  Alessio Basti, Guido Nolte, Roberto Guidotti, R. Ilmoniemi, G. Romani, et al. · Scientific Reports · 4 citations

2023

• Predicting outcome with Intranasal Esketamine treatment: A machine-learning, three-month study in Treatment-Resistant Depression (ESK-LEARNING).
  M. Pettorruso, Roberto Guidotti, G. d’Andrea, Luisa De Risio, A. D’Andrea, et al. · Psychiatry research · 48 citations

• Long-Term and Meditation-Specific Modulations of Brain Connectivity Revealed Through Multivariate Pattern Analysis
  Roberto Guidotti, A. D’Andrea, Alessio Basti, A. Raffone, V. Pizzella, et al. · Brain Topography · 21 citations

• Modulating brain networks in space and time: Multi-locus transcranial magnetic stimulation.
  H. Sinisalo, Ilkka Rissanen, Olli-Pekka Kahilakoski, V. Souza, Timo Tommila, et al. · Clinical neurophysiology : official journal of the International Federation of Clinical Neurophysiology · 17 citations

• TMS-Induced Modulation of EEG Functional Connectivity Is Affected by the E-Field Orientation
  Giulia Pieramico, Roberto Guidotti, Aino E. Nieminen, A. D’Andrea, Alessio Basti, et al. · Brain Sciences · 13 citations

• Towards real-time identification of large-scale brain states for improved brain state-dependent stimulation.
  L. Marzetti, Saeed Makkinayeri, Giulia Pieramico, Roberto Guidotti, A. D’Andrea, et al. · Clinical neurophysiology : official journal of the International Federation of Clinical Neurophysiology · 13 citations

• Accurate and precise digital real-time control of transcranial magnetic stimulation
  Olli-Pekka Kahilakoski, H. Sinisalo, Jaakko O. Nieminen, Kim Valén, Kyösti Alkio, et al. · Brain Stimulation · 1 citations

2022

• Looking through the windows: a study about the dependency of phase-coupling estimates on the data length
  Alessio Basti, F. Chella, Roberto Guidotti, M. Ermolova, A. D’Andrea, et al. · Journal of Neural Engineering · 26 citations

• Effects of a narrative template on memory for the time of movie scenes: automatic reshaping is independent of consolidation
  Matteo Frisoni, Monica Di Ghionno, Roberto Guidotti, A. Tosoni, C. Sestieri · Psychological Research · 9 citations

• Looking through the windows: a study about the dependency of phase-coupling estimates on the data length.
  Alessio Basti, F. Chella, Roberto Guidotti, M. Ermolova, A. D’Andrea, et al. · Journal of neural engineering · 1 citations

• Magnetoencephalographic spectral fingerprints differentiate evidence accumulation from saccadic motor preparation in perceptual decision-making
  A. D’Andrea, Alessio Basti, A. Tosoni, Roberto Guidotti, F. Chella, et al. · iScience · 1 citations

2021

• Neuroplasticity within and between Functional Brain Networks in Mental Training Based on Long-Term Meditation
  Roberto Guidotti, C. Del Gratta, M. G. Perrucci, G. Romani, A. Raffone · Brain Sciences · 19 citations

• Software architecture for closed-loop multi-locus transcranial magnetic stimulation
  Olli-Pekka Kahilakoski, Juuso T. Korhonen, V. Souza, Roberto Guidotti, D. Aydogan, et al. · Brain Stimulation · 1 citations

• Intrinsic motor network connectivity predicts corticospinal excitability
  L. Marzetti, Alessio Basti, F. Chella, Roberto Guidotti, J. Metsomaa, et al. · Brain Stimulation

2020

• Decoding working memory task condition using magnetoencephalography source level long-range phase coupling patterns
  J. Syrjälä, Alessio Basti, Roberto Guidotti, L. Marzetti, V. Pizzella · Journal of Neural Engineering · 17 citations

• Reconstructive nature of temporal memory for movie scenes.
  Matteo Frisoni, Monica Di Ghionno, Roberto Guidotti, A. Tosoni, C. Sestieri · Cognition · 16 citations

• Properties and temporal dynamics of choice- and action-predictive signals during item recognition decisions
  Roberto Guidotti, A. Tosoni, C. Sestieri · Brain Structure & Function · 5 citations

2019

• Choice‐predictive activity in parietal cortex during source memory decisions
  Roberto Guidotti, A. Tosoni, M. G. Perrucci, C. Sestieri · Neuroimage · 18 citations

• Disentangling functional connectivity effects of age and expertise in long-term meditators
  Roberto Guidotti, C. Gratta, M. G. Perrucci, G. Romani, A. Raffone · bioRxiv · 2 citations

2018

• Multimodal‐3D imaging based on μMRI and μCT techniques bridges the gap with histology in visualization of the bone regeneration process
  Raffaele Sinibaldi, A. Conti, B. Sinjari, S. Spadone, R. Pecci, et al. · Journal of Tissue Engineering and Regenerative Medicine · 32 citations

• Visual versus auditory Simon effect: A behavioural and physiological investigation
  S. D’Ascenzo, L. Lugli, Giulia Baroni, Roberto Guidotti, S. Rubichi, et al. · Quarterly Journal of Experimental Psychology · 19 citations

• Optimized 3D co-registration of ultra-low-field and high-field magnetic resonance images
  Roberto Guidotti, Raffaele Sinibaldi, C. De Luca, A. Conti, R. Ilmoniemi, et al. · PLoS ONE · 12 citations

2017

• Prediction of meditation experience using fMRI functional connectivity and multivariate pattern analysis
  Roberto Guidotti, C. Gratta, M. G. Perrucci, G. Romani, A. Raffone · ** · 3 citations

2016

• Practice-induced and sequential modulations in the Simon task: evidence from pupil dilation.
  S. D’Ascenzo, C. Iani, Roberto Guidotti, B. Laeng, S. Rubichi · International journal of psychophysiology : official journal of the International Organization of Psychophysiology · 12 citations

• Preferential coding of eye/hand motor actions in the human ventral occipito-temporal cortex.
  A. Tosoni, Roberto Guidotti, C. Del Gratta, G. Committeri, C. Sestieri · Neuropsychologia · 10 citations

2015

• Visual Learning Induces Changes in Resting-State fMRI Multivariate Pattern of Information
  Roberto Guidotti, C. Del Gratta, A. Baldassarre, G. Romani, M. Corbetta · The Journal of Neuroscience · 49 citations

2013

• Software tools for the quantitative evaluation of dental treatment effects from µCT scans
  Raffaele Sinibaldi, A. Conti, R. Pecci, G. Plotino, Roberto Guidotti, et al. · Journal of Biomedical Graphics and Computing · 4 citations